DrugDevCovid19

Tracking the relevant researches of CADD drug development against COVID-19

Cinacalcet

ID MW HBD HBA
156419  357.410
RB NOA Rings logP
6136.14

Function

DrugBank ID:

DB01012


Description:

Cinacalcet is a calcimimetic sold by Amgen under the trade name Sensipar® in North America and Australia and as Mimpara® in Europe. It is used to treat hyperparathyroidism due to parathyroid tumours or renal failure. [DrugBank]

Targets:

Extracellular calcium-sensing receptor (Humans) [DrugBank]

Pharmacodynamics:

Cinacalcet is a drug that acts as a calcimimetic (i.e. it mimics the action of calcium on tissues). Secondary hyperparathyroidism (HPT) in patients with chronic kidney disease (CKD) is a progressive disease, associated with increases in parathyroid hormone (PTH) levels and derangements in calcium and phosphorus metabolism. Increased PTH stimulates osteoclastic activity resulting in cortical bone resorption and marrow fibrosis. The goals of treatment of secondary hyperparathyroidism are to lower levels of PTH, calcium, and phosphorus in the blood, in order to prevent progressive bone disease and the systemic consequences of disordered mineral metabolism. In CKD patients on dialysis with uncontrolled secondary HPT, reductions in PTH are associated with a favorable impact on bone-specific alkaline phosphatase (BALP), bone turnover and bone fibrosis. Cinacalcet reduces calcium levels by increasing the sensitivity of the calcium sensing receptor to extracellular calcium. [DrugBank]

Structures

SMILES:

C[C@@H](NCCCc1cccc(C(F)(F)F)c1)c1cccc2ccccc12

2D structures:  

3D structures:  

Docking in target protein

Receptor: PL-PRO

Docking Site: S3/S4 pockets

Ligand: Cinacalcet

Vina score: -9.3

Off-target analysis based on ligand similarity (Homo sapiens)

Step 1 - Target prediction for Cinacalcet: SwissTargetPrediction

Tips: Click on the link to jump to the 'SwissTargetPrediction' webserver. Select the species of 'Homo sapiens', and then paste the SMILES of Cinacalcet in the SMILES input box.

Step 2 - Blind docking for Cinacalcet: CB-Dock

Tips: Click on the link to jump to the 'CB-Dock' webserver. Upload the structure file of target predicted by 'SwissTargetPrediction' and the 2D/3D structure file of Cinacalcet to perform blind docking.